EpiTrace :: An algorithm to decode single cell replicational age from chromatin accessibility data.
EpiTrace is designed for deriving a reference time axis for development, disease, and ageing.
It works across a wide range of species, ranging from yeast to human.
Documentation: https://epitrace.readthedocs.io/
Code: https://github.com/MagpiePKU/EpiTrace
scLineageFidelity :: An algorithm to infer developmental lineage fidelity of single mammalian cells.
scLineageFidelity is designed for analyzing development, oncogenesis, tumor evolution, and regeneration.
Documentation and code: https://github.com/MagpiePKU/scLineageFidelity